Package 'bauw'

Title: Data from Bayesian Population Analysis using Winbugs
Description: What the package does (one paragraph).
Authors: Joe Thorley [aut, cre]
Maintainer: Joe Thorley <[email protected]>
License: file LICENSE
Version: 0.0.0.9001
Built: 2024-09-20 12:39:01 UTC
Source: https://github.com/poissonconsulting/bauw

Help Index


"Blue bug" Woodpile Counts

Description

The cerambycid "blue bug" beetle (Rosalia alpina) replicated woodpile counts from the hills around Movelier in the Swiss Jura mountains by Michaeal Schaub in 2009 from Kery & Schaub (2011 p.427-428).

Usage

bluebug

Format

A data frame with 27 rows and 21 columns

Details

The variables are as follows:

  • site the site (woodpile).

  • siteno the site number (w.

  • forest_edge a indicator variable for whether or not the site was on the edge of the forest.

  • det1, det2, ..., det6 the larval count by visit.

  • date1, date2, ..., date6 the date by visit.

  • h1, h2, ..., h6 the hours in the afternoon by visit.

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Six-spot burnet moth counts

Description

The six-spot burnet moth (Zygaena filipendulae) replicate counts from the Swiss butterfly monitoring program from Kery & Schaub (2011 p.445-446).

Usage

burnet

Format

A data frame with 665 rows and 4 columns

Details

The variables are as follows:

  • site the site.

  • day the day ("season").

  • count1 the first count.

  • count2 the second count.

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Fritillary butterfly abundance data

Description

The silver-washed fritillary (Argynnis paphia) butterfly duplicate site counts from Kery & Schaub (2011 p.396).

Usage

fritillary

Format

A data frame with 665 rows and 4 columns

Details

The variables are as follows:

  • site the site surveyed.

  • day the day of the survey.

  • count1 the first count.

  • count2 the second count.

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


House martin annual counts

Description

The house martin (Delichon urbica) population annual counts from Magden (a small village in Northern Switzerland) collected by Reto Freuler from 1990 to 2009.

Usage

hm

Format

A data frame with 20 rows and 2 columns

Details

The variables are as follows:

  • hm the count (integer).

  • year the year (integer).

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Leisler's bats survival data

Description

The female Leisler's bats (Nyctalus leisleri) capture-recapture data collected by Wigbert Schorcht and colleagues in Thuringia (Germany) from 1989 to 2008 from Kery & Schaub (2011 p.231).

Usage

leisleri

Format

A data frame with 181 rows and 19 columns

Details

The variables are as follows:

  • V1, V2, ..., V19 an indicator variable specify whether or not the individual was 0 = undetected or 1 = detected.

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Showy lady's slipper capture-recapture data

Description

The showy lady's slipper (Cypripedium reginae) capture-recapture data collected by Kathy Gregg in Big Draft (West Virginia) from 1989 to 1999 from Kery & Schaub (2011 p.166).

Usage

orchids

Format

A data frame with 250 rows and 11 columns

Details

The variables are as follows:

  • V1, V2, ..., V11 the state of the individual plant by year where 0 = undetected, 1 = vegetative and 2 = flowering.

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Long-eared owl detections

Description

The long-eared owl (Asio otus) territory replicate detections from the 2009 breeding season by Simon Birrer from Kery & Schaub (2011 p.454).

Usage

owls

Format

A data frame with 40 rows and 11 columns

Details

The variables are as follows:

  • territory the territory.

  • obs1, obs2, ..., obs5 the count by visit.

  • date1, date2, ..., date5 the day of the year by visit.

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Point count number 610 data

Description

The bird point count data from the Czech republic for point count number 610 in 2004-2005.

Usage

p610

Format

A data frame with 146 rows and 9 columns

Details

The variables are as follows:

  • species the species (factor with 146 levels).

  • point the point count number (integer with one value 610).

  • bm body mass (grams)

  • specnr the species number (integer with 146 values).

  • count1, count2, ..., count5 the number of individuals counted by occasion (1-5).

Source

Kery & Schaub (2011 p.157) courtesy of Jiri Reif

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Peregrine falcon breeding population data

Description

The peregrine falcon (Falco peregrinus) population breeding in the French Jura from 1964 to 2003.

Usage

peregrine

Format

A data frame with 40 rows and 4 columns

Details

The variables are as follows:

  • Year the year (integer).

  • Pairs the number of adult pairs (integer).

  • R.pairs the number of reproductive pairs (integer).

  • Eyasses the number of fledged young (integer).

Source

Kery & Schaub (2011 p.64-65) courtesy of R.-J. Monneret

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Pen shell detection data

Description

The pen shell (Pinna nobilis) detection data from the Balearic Islands in 2010.

Usage

pinna

Format

A data frame with 143 rows and 3 columns

Details

The variables are as follows:

  • d1 indicator for shell detected by first team.

  • d2 indicator for shell detected by second team.

  • width shell width (cm).

Source

Kery & Schaub (2011 p.166) courtesy of Iris Hendriks and colleagues

References

Kery M & Schaub M (2011) Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)


Coal tits breeding survey data

Description

The Swiss coal tit (Parus ater) annual territory counts from the Swiss breeding bird survey MHB from 1999 to 2007.

Usage

tits

Format

A data frame with 235 rows and 31 columns

Details

The variables are as follows:

  • site the site code (factor with 235 levels).

  • spec the species (factor with one level = "Coaltit").

  • elevation the elevation im masl (integer).

  • forest the percent forest cover (integer).

  • y1999, y2000, ..., y2007 the site count by year (integer).

  • obs1999, obs2000, ..., obs2007 the observer code by year (integer).

  • first1999, first2000, ..., first2007 the first-time observer indicator by year (integer with two values 0 or 1).

References

Kery M & Schaub M Bayesian Population Analysis using WinBUGS. Academic Press. (https://www.vogelwarte.ch/en/research/population-biology/book-bpa/)