{
  "_id": "6a1d675b1d7bb097a0a4d4f5",
  "Package": "universals",
  "Title": "S3 Generics for Bayesian Analyses",
  "Version": "0.0.5.9000",
  "Authors@R": "c(\nperson(\"Joe\", \"Thorley\", , \"joe@poissonconsulting.ca\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-7683-4592\")),\nperson(\"Kirill\", \"Müller\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-1416-3412\")),\nperson(\"Poisson Consulting\", role = c(\"cph\", \"fnd\"))\n)",
  "Description": "Provides S3 generic methods and some default\nimplementations for Bayesian analyses that generate Markov\nChain Monte Carlo (MCMC) samples.  The purpose of 'universals'\nis to reduce package dependencies and conflicts.  The 'nlist'\npackage implements many of the methods for its 'nlist' class.",
  "License": "MIT + file LICENSE",
  "URL": "https://poissonconsulting.github.io/universals/,\nhttps://github.com/poissonconsulting/universals",
  "BugReports": "https://github.com/poissonconsulting/universals/issues",
  "Config/Needs/website": "poissonconsulting/poissontemplate",
  "Encoding": "UTF-8",
  "Language": "en-US",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "Repository": "https://poissonconsulting.r-universe.dev",
  "Date/Publication": "2025-06-03 21:56:21 UTC",
  "RemoteUrl": "https://github.com/poissonconsulting/universals",
  "RemoteRef": "HEAD",
  "RemoteSha": "01f78471d4a23144bf13a94932fa1997e6cd1610",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-01 10:52:46 UTC",
    "User": "root"
  },
  "Author": "Joe Thorley [aut, cre] (ORCID: <https://orcid.org/0000-0002-7683-4592>),\nKirill Müller [ctb] (ORCID: <https://orcid.org/0000-0002-1416-3412>),\nPoisson Consulting [cph, fnd]",
  "Maintainer": "Joe Thorley <joe@poissonconsulting.ca>",
  "MD5sum": "92fb4a0a3acc4968ed247493bce0f2d6",
  "_user": "poissonconsulting",
  "_type": "src",
  "_file": "universals_0.0.5.9000.tar.gz",
  "_fileid": "f233126a711cc8b1a9017ca0057f808f0a4834c14a381cd0071a1743bdc51053",
  "_filesize": 196440,
  "_sha256": "f233126a711cc8b1a9017ca0057f808f0a4834c14a381cd0071a1743bdc51053",
  "_created": "2026-06-01T10:52:46.000Z",
  "_published": "2026-06-01T11:04:59.902Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78836949503,
      "time": 167,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7329645943"
    },
    {
      "job": 78836949493,
      "time": 108,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329626353"
    },
    {
      "job": 78836949555,
      "time": 132,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7329812565"
    },
    {
      "job": 78836949486,
      "time": 79,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329768510"
    },
    {
      "job": 78836513035,
      "time": 167,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329590170"
    },
    {
      "job": 78836949470,
      "time": 93,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329621387"
    },
    {
      "job": 78836949529,
      "time": 127,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7329632722"
    },
    {
      "job": 78836949621,
      "time": 58,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7329610471"
    },
    {
      "job": 78836949535,
      "time": 68,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329612608"
    }
  ],
  "_buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/poissonconsulting/universals",
  "_commit": {
    "id": "01f78471d4a23144bf13a94932fa1997e6cd1610",
    "author": "Duncan Kennedy <duncan@poissonconsulting.ca>",
    "committer": "Duncan Kennedy <duncan@poissonconsulting.ca>",
    "message": "Deleted pull_request_template.md so `.github` default community health files are used.",
    "time": 1748987781
  },
  "_maintainer": {
    "name": "Joe Thorley",
    "email": "joe@poissonconsulting.ca",
    "login": "joethorley",
    "orcid": "0000-0002-7683-4592",
    "description": "A computational biologist who performs Bayesian analyses using R, STAN and JAGS.\n",
    "uuid": 613671
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.6",
      "role": "Depends"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "nlist",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "poissonconsulting",
  "_selfowned": true,
  "_usedby": 24,
  "_updates": [
    {
      "week": "2025-23",
      "n": 2
    }
  ],
  "_tags": [],
  "_topics": [
    "generics",
    "model-fitting",
    "s3"
  ],
  "_stars": 4,
  "_contributors": [
    {
      "user": "joethorley",
      "count": 195,
      "uuid": 613671
    },
    {
      "user": "krlmlr",
      "count": 7,
      "uuid": 1741643
    },
    {
      "user": "nadinehussein",
      "count": 5,
      "uuid": 74937983
    },
    {
      "user": "aylapear",
      "count": 1,
      "uuid": 42985574
    }
  ],
  "_userbio": {
    "uuid": 1679318,
    "type": "organization",
    "name": "Poisson Consulting Ltd.",
    "description": "Computational Biology and Statistical Ecology"
  },
  "_downloads": {
    "count": 574,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/universals"
  },
  "_devurl": "https://github.com/poissonconsulting/universals",
  "_pkgdown": "https://poissonconsulting.github.io/universals/",
  "_searchresults": 1,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/universals.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/poissonconsulting/universals",
  "_realowner": "poissonconsulting",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.0.1",
      "date": "2020-05-31"
    },
    {
      "version": "0.0.2",
      "date": "2020-06-11"
    },
    {
      "version": "0.0.3",
      "date": "2020-07-08"
    },
    {
      "version": "0.0.4",
      "date": "2020-09-24"
    },
    {
      "version": "0.0.5",
      "date": "2022-09-22"
    }
  ],
  "_exports": [
    "bind_chains",
    "bind_iterations",
    "collapse_chains",
    "converged",
    "converged_pars",
    "converged_terms",
    "dims",
    "esr",
    "esr_pars",
    "esr_terms",
    "estimates",
    "nchains",
    "ndims",
    "niters",
    "npars",
    "npdims",
    "nsams",
    "nsims",
    "nterms",
    "pars",
    "pars<-",
    "pdims",
    "rhat",
    "rhat_pars",
    "rhat_terms",
    "set_pars",
    "split_chains"
  ],
  "_help": [
    {
      "page": "bind_chains",
      "title": "Bind by Chains.",
      "concept": [
        "MCMC manipulations"
      ],
      "topics": [
        "bind_chains"
      ]
    },
    {
      "page": "bind_iterations",
      "title": "Bind Iterations",
      "concept": [
        "MCMC manipulations"
      ],
      "topics": [
        "bind_iterations"
      ]
    },
    {
      "page": "collapse_chains",
      "title": "Collapse Chains",
      "concept": [
        "MCMC manipulations"
      ],
      "topics": [
        "collapse_chains",
        "collapse_chains.default"
      ]
    },
    {
      "page": "converged",
      "title": "Converged",
      "concept": [
        "convergence"
      ],
      "topics": [
        "converged"
      ]
    },
    {
      "page": "converged_pars",
      "title": "Converged Parameters",
      "concept": [
        "convergence"
      ],
      "topics": [
        "converged_pars"
      ]
    },
    {
      "page": "converged_terms",
      "title": "Converged Terms",
      "concept": [
        "convergence"
      ],
      "topics": [
        "converged_terms"
      ]
    },
    {
      "page": "dims",
      "title": "Dimensions",
      "concept": [
        "dimensions"
      ],
      "topics": [
        "dims",
        "dims.default",
        "dims.factor"
      ]
    },
    {
      "page": "esr",
      "title": "Effective Sampling Rate",
      "concept": [
        "convergence"
      ],
      "topics": [
        "esr"
      ]
    },
    {
      "page": "esr_pars",
      "title": "Effective Sampling Rate for Parameters",
      "concept": [
        "convergence"
      ],
      "topics": [
        "esr_pars"
      ]
    },
    {
      "page": "esr_terms",
      "title": "Effective Sampling Rate for Terms",
      "concept": [
        "convergence"
      ],
      "topics": [
        "esr_terms"
      ]
    },
    {
      "page": "estimates",
      "title": "Estimates",
      "concept": [
        "MCMC manipulations"
      ],
      "topics": [
        "estimates"
      ]
    },
    {
      "page": "nchains",
      "title": "Number of Chains",
      "concept": [
        "MCMC dimensions"
      ],
      "topics": [
        "nchains"
      ]
    },
    {
      "page": "ndims",
      "title": "Number of Dimensions",
      "concept": [
        "dimensions"
      ],
      "topics": [
        "ndims",
        "ndims.data.frame",
        "ndims.default",
        "ndims.matrix"
      ]
    },
    {
      "page": "niters",
      "title": "Number of Iterations",
      "concept": [
        "MCMC dimensions"
      ],
      "topics": [
        "niters"
      ]
    },
    {
      "page": "npars",
      "title": "Number of Parameters",
      "concept": [
        "MCMC dimensions",
        "parameters"
      ],
      "topics": [
        "npars",
        "npars.default"
      ]
    },
    {
      "page": "npdims",
      "title": "Number of Parameter Dimensions",
      "concept": [
        "dimensions"
      ],
      "topics": [
        "npdims",
        "npdims.default"
      ]
    },
    {
      "page": "nsams",
      "title": "Number of Samples",
      "concept": [
        "MCMC dimensions"
      ],
      "topics": [
        "nsams",
        "nsams.default"
      ]
    },
    {
      "page": "nsims",
      "title": "Number of Simulations",
      "concept": [
        "MCMC dimensions"
      ],
      "topics": [
        "nsims",
        "nsims.default"
      ]
    },
    {
      "page": "nterms",
      "title": "Number of Terms",
      "concept": [
        "MCMC dimensions"
      ],
      "topics": [
        "nterms"
      ]
    },
    {
      "page": "pars",
      "title": "Parameter Names",
      "concept": [
        "parameters"
      ],
      "topics": [
        "pars"
      ]
    },
    {
      "page": "pdims",
      "title": "Parameter Dimensions",
      "concept": [
        "dimensions"
      ],
      "topics": [
        "pdims"
      ]
    },
    {
      "page": "rhat",
      "title": "R-hat",
      "concept": [
        "convergence"
      ],
      "topics": [
        "rhat"
      ]
    },
    {
      "page": "rhat_pars",
      "title": "R-hat Parameters",
      "concept": [
        "convergence"
      ],
      "topics": [
        "rhat_pars"
      ]
    },
    {
      "page": "rhat_terms",
      "title": "R-hat Terms",
      "concept": [
        "convergence"
      ],
      "topics": [
        "rhat_terms"
      ]
    },
    {
      "page": "set_pars",
      "title": "Set Parameters",
      "concept": [
        "parameters"
      ],
      "topics": [
        "pars<-",
        "set_pars"
      ]
    },
    {
      "page": "split_chains",
      "title": "Split Chains",
      "concept": [
        "MCMC manipulations"
      ],
      "topics": [
        "split_chains"
      ]
    }
  ],
  "_pkglogo": "https://github.com/poissonconsulting/universals/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/poissonconsulting/universals/raw/HEAD/README.md",
  "_rundeps": [],
  "_score": 5.635483746814913,
  "_indexed": true,
  "_nocasepkg": "universals",
  "_universes": [
    "poissonconsulting",
    "joethorley"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.5.9000",
      "date": "2026-06-01T10:54:49.000Z",
      "distro": "noble",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "18f03f4bfa4eb0ecc42c24dcfa720a7c1695b1841d4cbf5d3d08488e2a517997",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.0.5.9000",
      "date": "2026-06-01T10:54:45.000Z",
      "distro": "noble",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "abe420cd2cbb6f8fbd2679d0d8ad8f485582063f460ce3a999cade32910f3911",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.5.9000",
      "date": "2026-06-01T11:04:34.000Z",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "d02a0b4dd2627788ac1d77438e72e57dc294190b576215b8ab4f76c0eee2c504",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.0.5.9000",
      "date": "2026-06-01T11:02:12.000Z",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "24a08689a985aed3701d748c956357d9284e250fee2afa0eb9f16f6015ee7303",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.5.9000",
      "date": "2026-06-01T10:54:38.000Z",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "80029d8d1ba8eab99a69560d66d4b3dae19f76b1710cd75d4e51c6b679a24241",
      "status": "success",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.5.9000",
      "date": "2026-06-01T10:54:58.000Z",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "466227e6664698b867e8c7565f92b09c5f493a6e371fb5260bbf3c3deba05071",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.5.9000",
      "date": "2026-06-01T10:53:53.000Z",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "0b2516f32bb5d214360bc53aa125106f3322f60a2fc456fc20373c1b159810ec",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.0.5.9000",
      "date": "2026-06-01T10:53:58.000Z",
      "commit": "01f78471d4a23144bf13a94932fa1997e6cd1610",
      "fileid": "f988e130892b82525169b7d473f38ff1490038c47ffcadee5b643e94811af04b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/poissonconsulting/actions/runs/26750357221"
    }
  ]
}